C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sap30-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000029763 sap30l-001 ENSDARG00000030213 7955 - 21:44203374-44206894 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000029763
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000029763 12.863±13.77 42.389±19.74 3.067±0.00 6.791±0.00 27.041±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296504 SAP30-001 protein_coding Homo_sapiens 4e-22 110
ENST00000297109 SAP30L-001 protein_coding Homo_sapiens 0 302
ENST00000426761 SAP30L-004 protein_coding Homo_sapiens 1e-35 154
ENST00000440364 SAP30L-003 protein_coding Homo_sapiens 1e-36 158
ENST00000520159 SAP30L-006 processed_transcript Homo_sapiens 0 202
ENST00000523198 SAP30L-005 processed_transcript Homo_sapiens 0 202

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