C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SAP30-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000426761  |
SAP30L-004 |
ENSG00000164576 |
9606 | + |
5:154446545-154456331  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009C8 | CIL_0009C8_0001 | VISTA | 5:153896309-154498445 |
| CIL_00094E | CIL_00094E_0001 | VISTA | 5:153896347-154498404 |
| CIL_0001UJ | CIL_0001UJ_0001 | CGP | 5:154190730-154461054 |
| CIL_00099I | CIL_00099I_0001 | VISTA | 5:154192067-154792416 |
| CIL_00088D | CIL_00088D_0001 | VISTA | 5:154298500-154906275 |
| CIL_0001UK | CIL_0001UK_0001 | CGP | 5:154445957-154478264 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000020826
|
Sap30l-001 | protein_coding | Mus_musculus | 0 | 390 |
|
ENSDART00000029763
|
sap30l-001 | protein_coding | Danio_rerio | 1e-35 | 154 |
