C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAX interacting (with transcription-activation domain) protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000031130 paxip1-201 ENSDARG00000005606 7955 - 2:29617511-29638186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000031130
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000031130 3.533±0.00 0.689±0.04 1.932±0.67 0.587±0.00 1.276±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K5 CIL_0000K5_0001 CGP 2:29617508-29653812

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002291 Paxip1-201 protein_coding Mus_musculus 0 353
ENST00000397192 PAXIP1-201 protein_coding Homo_sapiens 0 420
ENST00000404141 PAXIP1-001 protein_coding Homo_sapiens 0 420
ENST00000457196 PAXIP1-006 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000464717 PAXIP1-005 retained_intron Homo_sapiens 0 270
ENST00000473219 PAXIP1-002 processed_transcript Homo_sapiens 0 420
ENST00000485730 PAXIP1-009 retained_intron Homo_sapiens 2e-36 156

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