C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD, mothers against decapentaplegic homolog 3b (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000043455 smad3b-001 ENSDARG00000010207 7955 + 18:19553585-19586920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000043455
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000043455 3.956±1.45 4.299±3.89 1.344±0.00 0.343±0.00 10.832±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000471 CIL_000471_0001 CGP 18:19428986-19586920
CIL_00046Z CIL_00046Z_0001 CGP 18:19553585-19600523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034973 Smad3-001 protein_coding Mus_musculus 0 996
ENST00000327367 SMAD3-001 protein_coding Homo_sapiens 0 1007

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