C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box B8a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000046638 hoxb8a-001 ENSDARG00000056027 7955 + 3:23979150-23981722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000046638
Transcript ID Brain Heart Kidney Muscle
ENSDART00000046638 0.150±0.12 0.062±0.00 16.683±7.71 1.769±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004H7 CIL_0004H7_0001 CGP 3:23968592-23981722
CIL_0004GM CIL_0004GM_0001 CGP 3:23979150-23987449

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313173 HOXD8-001 protein_coding Homo_sapiens 9e-16 90
ENST00000429017 HOXD8-002 protein_coding Homo_sapiens 8e-16 90
ENST00000450510 HOXD8-003 protein_coding Homo_sapiens 1e-18 99
ENST00000544999 HOXD8-004 protein_coding Homo_sapiens 6e-16 90

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