C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small G protein signaling modulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000047841 SGSM1 (1 of 2)-201 ENSDARG00000028857 7955 + 5:21818597-21876524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENSDART00000047841
Transcript ID Heart Muscle
ENSDART00000047841 0.150±0.04 0.232±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048112 Sgsm1-001 protein_coding Mus_musculus 0 520
ENSMUST00000057209 Sgsm1-004 protein_coding Mus_musculus 0 520
ENST00000268989 SGSM2-002 protein_coding Homo_sapiens 0 327
ENST00000426855 SGSM2-001 protein_coding Homo_sapiens 0 327
ENST00000572841 SGSM2-008 retained_intron Homo_sapiens 0 276
ENST00000574563 SGSM2-003 protein_coding Homo_sapiens 0 300

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