C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SLIT-ROBO Rho GTPase activating protein 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000048707 srgap2b-201 ENSDARG00000045789 7955 + 4:8351789-8405486 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KR CIL_0002KR_0001 CGP 4:8351360-8422161

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020322 Srgap1-001 protein_coding Mus_musculus 0 806
ENSMUST00000081688 Srgap1-201 protein_coding Mus_musculus 0 278
ENSMUST00000161996 Srgap1-003 processed_transcript Mus_musculus 0 195
ENST00000612199 SRGAP2B-001 protein_coding Homo_sapiens 1e-39 171
ENST00000619678 SRGAP2B-201 protein_coding Homo_sapiens 3e-40 171
ENST00000621582 SRGAP2B-005 nonsense_mediated_decay Homo_sapiens 1e-23 113

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