C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000051196 taf1-001 ENSDARG00000035330 7955 - 5:38151807-38192557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051196
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051196 13.246±0.39 2.287±1.14 2.277±2.10 0.462±0.00 0.776±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005669 IEA transcription factor TFIID complex
GO:0006352 IEA DNA-dependent transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242310 TAF1L-001 protein_coding Homo_sapiens 0 761
ENST00000276072 TAF1-008 protein_coding Homo_sapiens 0 856
ENST00000373775 TAF1-014 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000373790 TAF1-009 protein_coding Homo_sapiens 0 856
ENST00000423759 TAF1-201 protein_coding Homo_sapiens 0 857
ENST00000437147 TAF1-010 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000461764 TAF1-021 processed_transcript Homo_sapiens 0 289
ENST00000462588 TAF1-012 processed_transcript Homo_sapiens 0 289
ENST00000468167 TAF1-011 processed_transcript Homo_sapiens 0 204
ENST00000485087 TAF1-013 processed_transcript Homo_sapiens 0 289
ENST00000492404 TAF1-015 processed_transcript Homo_sapiens 0 209

Loading