C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000437147  |
TAF1-010 |
ENSG00000147133 |
9606 | + |
X:71406679-71530361  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00066O | CIL_00066O_0001 | CGP | X:71301734-71532374 |
| CIL_0000TR | CIL_0000TR_0001 | CGP | X:71366239-71575897 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000143908
|
Taf1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 1923 |
|
ENSMUST00000101341
|
Taf1-201 | protein_coding | Mus_musculus | 0 | 1423 |
|
ENSMUST00000129487
|
Taf1-003 | retained_intron | Mus_musculus | 0 | 1423 |
|
ENSMUST00000118878
|
Taf1-001 | protein_coding | Mus_musculus | 0 | 1423 |
|
ENSDART00000130225
|
taf1-202 | protein_coding | Danio_rerio | 0 | 505 |
|
ENSDART00000051196
|
taf1-001 | protein_coding | Danio_rerio | 0 | 505 |
|
ENSMUST00000140470
|
Taf1-004 | processed_transcript | Mus_musculus | 0 | 486 |
