C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000053129 snrpf-201 ENSDARG00000036570 7955 + Zv9_NA880:20080-23231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053129
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053129 12.533±8.94 33.257±29.40 50.872±3.39 6.921±0.00 21.251±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y3 CIL_0000Y3_0001 CGP Zv9_NA880:4250-23231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing
GO:0019012 IEA virion
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020203 Snrpf-001 protein_coding Mus_musculus 0 230
ENSMUST00000136346 Gm13092-001 processed_pseudogene Mus_musculus 0 213

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