C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13092
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136346 Gm13092-001 ENSMUSG00000085787 10090 - 4:150315177-150315436 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000136346
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000136346 2.043±0.64 2.272±0.92 0.339±0.02 1.070±0.00 3.406±1.39 1.967±1.24 1.261±0.57 3.734±2.48 0.757±0.66 4.075±1.00 5.965±4.94 0.564±0.00 3.781±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MK CIL_0003MK_0002 CGP 4:150236721-150621966

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053129 snrpf-201 protein_coding Danio_rerio 0 213
ENST00000266735 SNRPF-001 protein_coding Homo_sapiens 0 344
ENST00000414761 SNRPFP1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000440710 SNRPFP2-001 processed_pseudogene Homo_sapiens 0 222
ENST00000551316 SNRPF-002 retained_intron Homo_sapiens 2e-39 167
ENST00000552085 SNRPF-004 protein_coding Homo_sapiens 2e-39 167
ENST00000553192 SNRPF-003 protein_coding Homo_sapiens 1e-39 167

Loading