C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cyclin-dependent kinase 5, regulatory subunit 1a (p35)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000055262 cdk5r1a-001 ENSDARG00000037916 7955 + 3:34906623-34907616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000055262
Transcript ID Muscle
ENSDART00000055262 0.819±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RM CIL_0005RM_0002 CGP 3:34889244-34907616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016533 IEA cyclin-dependent protein kinase 5 holoenzyme complex
GO:0016534 IEA cyclin-dependent protein kinase 5 activator activity
GO:0016740 IEA transferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313401 CDK5R1-001 protein_coding Homo_sapiens 0 265
ENST00000584716 CDK5R1-002 nonsense_mediated_decay Homo_sapiens 8e-39 165
ENST00000584792 CDK5R1-003 protein_coding Homo_sapiens 5e-39 165

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