C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high density lipoprotein-binding protein a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000055771 hdlbpa-201 ENSDARG00000009830 7955 - 6:26584184-26600686 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042498 Hdlbp-003 protein_coding Mus_musculus 0 1546
ENSMUST00000170883 Hdlbp-001 protein_coding Mus_musculus 0 1546
ENSMUST00000186164 Hdlbp-004 protein_coding Mus_musculus 0 1003
ENST00000310931 HDLBP-003 protein_coding Homo_sapiens 0 353
ENST00000373292 HDLBP-004 protein_coding Homo_sapiens 0 254
ENST00000391975 HDLBP-001 protein_coding Homo_sapiens 0 353
ENST00000391976 HDLBP-002 protein_coding Homo_sapiens 0 353
ENST00000427183 HDLBP-201 protein_coding Homo_sapiens 0 353
ENST00000479894 HDLBP-050 retained_intron Homo_sapiens 9e-33 145
ENST00000483086 HDLBP-049 processed_transcript Homo_sapiens 8e-32 141
ENST00000487169 HDLBP-005 retained_intron Homo_sapiens 8e-30 137

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