C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000056641 smarcd3a-201 ENSDARG00000038786 7955 - 2:32232503-32273500 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000056641
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000056641 4.203±3.46 0.075±0.02 0.131±0.08 0.061±0.00 1.481±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262188 SMARCD3-002 protein_coding Homo_sapiens 0 843
ENST00000356800 SMARCD3-201 protein_coding Homo_sapiens 0 843
ENST00000392811 SMARCD3-001 protein_coding Homo_sapiens 0 843
ENST00000469154 SMARCD3-004 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000470588 SMARCD3-007 retained_intron Homo_sapiens 0 272
ENST00000496530 SMARCD3-015 processed_transcript Homo_sapiens 2e-17 94

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