Transcript Info |
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Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 | |||||
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Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000392811 | SMARCD3-001 | ENSG00000082014 | 9606 | - | 7:151238973-151277452 | protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
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Region ID | Sub-Region | Region Type | Position |
CIL_0008T1 | CIL_0008T1_0001 | VISTA | 7:150668461-151272977 |
CIL_0007RX | CIL_0007RX_0001 | VISTA | 7:151109813-151711422 |
CIL_0000KE | CIL_0000KE_0002 | CGP | 7:151207837-151238827 |
CIL_0006DG | CIL_0006DG_0002 | CGP | 7:151232489-151277896 |
CIL_0004EL | CIL_0004EL_0001 | CGP | 7:151238764-151378449 |
Gene Ontology | ||
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GO ID | Evidence Type | GO Description |
GO:0000790 | IDA | nuclear chromatin |
GO:0002052 | IDA | positive regulation of neuroblast proliferation |
GO:0003407 | IEP | neural retina development |
GO:0003713 | NAS | transcription coactivator activity |
GO:0005102 | IPI | receptor binding |
GO:0005515 | IPI:IEA | protein binding |
GO:0005634 | IDA | nucleus |
GO:0005654 | TAS | nucleoplasm |
GO:0005737 | IDA | cytoplasm |
GO:0006337 | IDA | nucleosome disassembly |
GO:0006338 | IDA | chromatin remodeling |
GO:0006351 | IDA | transcription, DNA-templated |
GO:0006357 | IMP | regulation of transcription from RNA polymerase II promoter |
GO:0008134 | IPI | transcription factor binding |
GO:0016514 | NAS | SWI/SNF complex |
GO:0016922 | IPI | ligand-dependent nuclear receptor binding |
GO:0030374 | IMP | ligand-dependent nuclear receptor transcription coactivator activity |
GO:0035257 | IPI | nuclear hormone receptor binding |
GO:0044255 | TAS | cellular lipid metabolic process |
GO:0044281 | TAS | small molecule metabolic process |
GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
GO:0071564 | ISS | npBAF complex |
GO:0071565 | ISS | nBAF complex |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000030791 | Smarcd3-001 | protein_coding | Mus_musculus | 0 | 2030 |
ENSMUST00000144995 | Smarcd3-002 | retained_intron | Mus_musculus | 0 | 1410 |
ENSMUST00000147857 | Smarcd3-006 | retained_intron | Mus_musculus | 0 | 922 |
ENSDART00000056641 | smarcd3a-201 | protein_coding | Danio_rerio | 0 | 843 |
ENSDART00000137531 | smarcd3a-002 | protein_coding | Danio_rerio | 0 | 843 |
ENSDART00000140026 | smarcd3a-001 | protein_coding | Danio_rerio | 0 | 843 |
ENSMUST00000143501 | Smarcd3-004 | retained_intron | Mus_musculus | 0 | 811 |
ENSMUST00000145565 | Smarcd3-003 | retained_intron | Mus_musculus | 0 | 798 |
ENSMUST00000140744 | Smarcd3-005 | retained_intron | Mus_musculus | 0 | 645 |
ENSMUST00000023759 | Smarcd1-201 | protein_coding | Mus_musculus | 0 | 556 |
ENSMUST00000144518 | Smarcd3-008 | retained_intron | Mus_musculus | 0 | 420 |
ENSMUST00000088295 | Chpf2-201 | protein_coding | Mus_musculus | 0 | 287 |