C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000057944 rpl26-001 ENSDARG00000039641 7955 - 14:53369688-53374265 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000057944
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000057944 104.707±142.64 981.742±1045.60 188.124±145.79 1228.950±0.00 1469.340±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015934 IEA large ribosomal subunit
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073471 Rpl26-001 protein_coding Mus_musculus 0 405
ENSMUST00000101014 Rpl26-002 protein_coding Mus_musculus 0 377
ENSMUST00000118045 Gm15896-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000134403 Rpl26-004 retained_intron Mus_musculus 0 302
ENSMUST00000138973 Rpl26-005 processed_transcript Mus_musculus 6e-22 108
ENSMUST00000167436 Rpl26-201 protein_coding Mus_musculus 0 405
ENST00000265100 RPL26L1-001 protein_coding Homo_sapiens 0 348
ENST00000415623 RP11-9E13.4-001 processed_pseudogene Homo_sapiens 0 274
ENST00000453533 RPL26P30-001 transcribed_processed_pseudogene Homo_sapiens 0 337
ENST00000519156 RPL26L1-005 protein_coding Homo_sapiens 0 337
ENST00000519239 RPL26L1-004 protein_coding Homo_sapiens 0 348
ENST00000519974 RPL26L1-002 protein_coding Homo_sapiens 0 348
ENST00000521476 RPL26L1-003 protein_coding Homo_sapiens 0 348
ENST00000602923 RPL26P30-002 processed_transcript Homo_sapiens 0 337

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