C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11a, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000060766 rab11a-001 ENSDARG00000041450 7955 + 18:18912484-18919863 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000060766
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000060766 64.016±7.28 23.304±9.65 26.159±5.67 7.460±0.00 15.033±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IMP angiogenesis
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0032402 IMP melanosome transport
GO:0055037 IDA recycling endosome
GO:0070121 IMP Kupffer's vesicle development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057373 Rab11b-001 protein_coding Mus_musculus 0 520
ENSMUST00000172894 Rab11b-005 protein_coding Mus_musculus 0 339
ENSMUST00000173860 Rab11b-002 protein_coding Mus_musculus 0 425
ENSMUST00000173987 Rab11b-004 nonsense_mediated_decay Mus_musculus 0 514
ENSMUST00000178377 Rab11b-ps2-201 processed_pseudogene Mus_musculus 0 514

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