C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173860 Rab11b-002 ENSMUSG00000077450 10090 - 17:33746750-33760306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173860 103.676±4.17 164.660±14.66 75.400±2.12 95.247±61.10 129.604±40.69 140.945±18.39 92.256±15.89 92.914±12.41 64.192±12.04 141.684±11.08 19.124±6.76 164.613±64.04 27.681±15.65 45.030±21.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016023 ISO cytoplasmic membrane-bounded vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133793 rab11ba-002 protein_coding Danio_rerio 0 468
ENSDART00000061366 rab11ba-001 protein_coding Danio_rerio 0 468
ENSDART00000060766 rab11a-001 protein_coding Danio_rerio 0 425
ENSDART00000148739 rab11ba-003 retained_intron Danio_rerio 3.9937e-43 180
ENST00000328024 RAB11B-001 protein_coding Homo_sapiens 0 758
ENST00000594216 RAB11B-002 protein_coding Homo_sapiens 0 584
ENST00000598706 RAB11B-003 retained_intron Homo_sapiens 1e-34 150
ENST00000600719 RAB11B-004 protein_coding Homo_sapiens 0 556
ENST00000601897 RAB11B-005 protein_coding Homo_sapiens 0 409

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