C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidic acid phosphatase type 2 domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000064603 ppapdc1b-001 ENSDARG00000057672 7955 - 10:20608632-20618205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000064603
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000064603 6.873±1.98 2.004±1.31 2.207±2.59 0.416±0.00 1.100±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YZ CIL_0003YZ_0001 CGP 10:20584608-20618267
CIL_0003Z2 CIL_0003Z2_0001 CGP 10:20608632-20669992

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000422581 PPAPDC1B-002 protein_coding Homo_sapiens 5e-20 102
ENST00000424479 PPAPDC1B-001 protein_coding Homo_sapiens 2e-23 115
ENST00000524616 PPAPDC1B-007 protein_coding Homo_sapiens 7e-24 115
ENST00000529359 PPAPDC1B-005 protein_coding Homo_sapiens 2e-23 115
ENST00000530193 PPAPDC1B-013 processed_transcript Homo_sapiens 2e-22 110
ENST00000530432 PPAPDC1B-012 retained_intron Homo_sapiens 0.000000000000001 88
ENST00000531109 PPAPDC1B-016 nonsense_mediated_decay Homo_sapiens 5e-24 115
ENST00000531823 PPAPDC1B-015 protein_coding Homo_sapiens 7e-24 115
ENST00000534339 PPAPDC1B-006 protein_coding Homo_sapiens 0.0000000000002 81

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