| Transcript ID | Brain | Lung | Placenta | Testis |
|---|---|---|---|---|
| ENST00000422581 | 0.431±0.00 | 0.502±0.00 | 2.857±0.00 | 1.773±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | phosphatidic acid phosphatase type 2 domain containing 1B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000422581  |
PPAPDC1B-002 |
ENSG00000147535 |
9606 | - |
8:38264739-38269207  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008NR | CIL_0008NR_0001 | VISTA | 8:38140056-38746180 |
| CIL_0003YZ | CIL_0003YZ_0002 | CGP | 8:38225218-38275558 |
| CIL_0008SM | CIL_0008SM_0001 | VISTA | 8:38252496-38854674 |
| CIL_0008H7 | CIL_0008H7_0001 | VISTA | 8:38253282-38854976 |
| CIL_0003Z2 | CIL_0003Z2_0002 | CGP | 8:38263130-38382272 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0005737 | TAS | cytoplasm |
| GO:0005886 | TAS | plasma membrane |
| GO:0008195 | IDA | phosphatidate phosphatase activity |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0046839 | IDA | phospholipid dephosphorylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000139836
|
Ppapdc1b-005 | protein_coding | Mus_musculus | 0 | 717 |
|
ENSMUST00000068916
|
Ppapdc1b-001 | protein_coding | Mus_musculus | 0 | 715 |
|
ENSMUST00000138548
|
Ppapdc1b-007 | processed_transcript | Mus_musculus | 0 | 579 |
|
ENSMUST00000124764
|
Ppapdc1b-002 | nonsense_mediated_decay | Mus_musculus | 0 | 573 |
|
ENSMUST00000133117
|
Ppapdc1b-004 | retained_intron | Mus_musculus | 0 | 460 |
|
ENSMUST00000138879
|
Ppapdc1b-008 | retained_intron | Mus_musculus | 0 | 431 |
|
ENSMUST00000139120
|
Ppapdc1b-006 | retained_intron | Mus_musculus | 0 | 318 |
|
ENSMUST00000145678
|
Ppapdc1b-003 | nonsense_mediated_decay | Mus_musculus | 0 | 318 |
|
ENSDART00000135341
|
ppapdc1b-002 | protein_coding | Danio_rerio | 5e-20 | 102 |
|
ENSDART00000064603
|
ppapdc1b-001 | protein_coding | Danio_rerio | 5e-20 | 102 |
