Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	phosphatidic acid phosphatase type 2 domain containing 1B
ENST00000524616	PPAPDC1B-007	ENSG00000147535	9606	-	8:38264351-38269196	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008NR	CIL_0008NR_0001	VISTA	8:38140056-38746180
CIL_0003YZ	CIL_0003YZ_0002	CGP	8:38225218-38275558
CIL_0008SM	CIL_0008SM_0001	VISTA	8:38252496-38854674
CIL_0008H7	CIL_0008H7_0001	VISTA	8:38253282-38854976
CIL_0003Z2	CIL_0003Z2_0002	CGP	8:38263130-38382272

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003824	IEA	catalytic activity
GO:0008195	IEA	phosphatidate phosphatase activity
GO:0016020	IEA	membrane
GO:0046839	IEA	phospholipid dephosphorylation

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000124764	Ppapdc1b-002	nonsense_mediated_decay	Mus_musculus	0	669
ENSMUST00000138548	Ppapdc1b-007	processed_transcript	Mus_musculus	0	658
ENSMUST00000068916	Ppapdc1b-001	protein_coding	Mus_musculus	0	658
ENSMUST00000139836	Ppapdc1b-005	protein_coding	Mus_musculus	0	523
ENSMUST00000139120	Ppapdc1b-006	retained_intron	Mus_musculus	0	390
ENSMUST00000133117	Ppapdc1b-004	retained_intron	Mus_musculus	0	390
ENSMUST00000145678	Ppapdc1b-003	nonsense_mediated_decay	Mus_musculus	0	318
ENSMUST00000138879	Ppapdc1b-008	retained_intron	Mus_musculus	0	268
ENSMUST00000146762	Ppapdc1b-010	retained_intron	Mus_musculus	1e-30	137
ENSDART00000135341	ppapdc1b-002	protein_coding	Danio_rerio	7e-24	115
ENSDART00000064603	ppapdc1b-001	protein_coding	Danio_rerio	7e-24	115

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