C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type IV, alpha 5 (Alport syndrome)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000073827 col4a5-001 ENSDARG00000052063 7955 + 7:52558412-52649610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000073827
Transcript ID Brain Heart Kidney Muscle
ENSDART00000073827 0.532±0.16 0.215±0.10 0.553±0.06 0.401±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000172 CIL_000172_0001 CGP 7:52375619-52649610
CIL_0002ST CIL_0002ST_0001 CGP 7:52558412-52704181

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen
GO:0007412 IMP axon target recognition
GO:0030198 IMP extracellular matrix organization
GO:0031290 IMP retinal ganglion cell axon guidance

Homologs

No Homologs available.

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