C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ST_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052063-ENSDARG00000052065 CGP 7955 7:52558412-52704181
GeneTranscriptPositionBiotype
ENSDARG00000052063 (col4a5)
collagen, type IV, alpha 5 (Alport syndrome) 		ENSDART00000073827 (col4a5-001) 52558412-52649610 protein_coding
ENSDART00000108738 (col4a5-201) 52594508-52648383 protein_coding
ENSDARG00000052065 (IRS4 (1 of 2))
insulin receptor substrate 4 		ENSDART00000008328 (IRS4 (1 of 2)-201) 52700940-52704181 protein_coding
ENSDARG00000085662 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121062 (5S_rRNA.1298-201) 52563704-52563818 rRNA
CIL_0002ST_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031274-ENSMUSG00000054667 CGP 10090 X:141475385-141725263
GeneTranscriptPositionBiotype
ENSMUSG00000031274 (Col4a5)
collagen, type IV, alpha 5 		ENSMUST00000112930 (Col4a5-002) 141475410-141689180 protein_coding
ENSMUST00000112931 (Col4a5-001) 141475385-141689234 protein_coding
ENSMUST00000128669 (Col4a5-004) 141658350-141675732 processed_transcript
ENSMUST00000130732 (Col4a5-003) 141630124-141689234 protein_coding
ENSMUSG00000054667 (Irs4)
insulin receptor substrate 4 		ENSMUST00000067841 (Irs4-001) 141710998-141725263 protein_coding
ENSMUSG00000081217 (Gm15268)
predicted gene 15268 		ENSMUST00000118845 (Gm15268-001) 141627959-141628468 processed_pseudogene
ENSMUSG00000081803 (Gm15282)
predicted gene 15282 		ENSMUST00000117707 (Gm15282-001) 141680442-141680741 processed_pseudogene
ENSMUSG00000086426 (Gm15295)
predicted gene 15295 		ENSMUST00000139874 (Gm15295-001) 141724838-141726163 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ST_0001ENSDARG00000052063ENSDART00000073827ENSDART00000108738ENSDARG00000052065ENSDART00000008328ENSDARG00000085662ENSDART00000121062CIL_0002ST_0002ENSMUSG00000031274ENSMUST00000112930ENSMUST00000112931ENSMUST00000128669ENSMUST00000130732ENSMUSG00000054667ENSMUST00000067841ENSMUSG00000081217ENSMUST00000118845ENSMUSG00000081803ENSMUST00000117707ENSMUSG00000086426ENSMUST00000139874
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ST_0001ENSDARG00000052063ENSDART00000073827ENSDART00000108738ENSDARG00000052065ENSDART00000008328ENSDARG00000085662ENSDART00000121062CIL_0002ST_0002ENSMUSG00000031274ENSMUST00000112930ENSMUST00000112931ENSMUST00000130732ENSMUSG00000054667ENSMUST00000067841ENSMUSG00000081217ENSMUST00000118845ENSMUSG00000081803ENSMUST00000117707ENSMUSG00000086426ENSMUST00000139874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052063 ENSDART00000073827 N/A N/A N/A 0.532±0.16 N/A N/A 0.215±0.10 0.553±0.06 N/A N/A 0.401±0.00 N/A N/A N/A
ENSDART00000108738 N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A
ENSDARG00000052065 ENSDART00000008328 N/A N/A N/A 0.944±0.87 N/A N/A 1.041±0.00 N/A 0.486±0.00 N/A 2.131±0.00 N/A N/A N/A
ENSDARG00000085662 ENSDART00000121062 N/A N/A N/A 8.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031274 ENSMUST00000112930 N/A N/A N/A N/A 0.927±0.02 0.866±0.30 N/A 1.185±0.00 0.066±0.00 N/A 0.391±0.07 4.722±3.19 0.868±0.81 0.145±0.05
ENSMUST00000112931 2.782±2.12 1.898±0.25 13.035±0.22 0.708±0.27 1.090±0.44 2.018±0.35 3.660±0.12 3.275±0.54 0.193±0.06 8.208±0.55 0.313±0.07 3.833±1.13 1.400±0.81 0.702±0.10
ENSMUST00000128669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130732 0.278±0.00 N/A 5.117±0.00 0.836±0.04 0.801±0.05 2.396±0.69 N/A N/A 0.109±0.03 N/A 0.191±0.06 N/A 0.543±0.46 0.458±0.16
ENSMUSG00000054667 ENSMUST00000067841 0.188±0.05 0.012±0.00 0.007±0.01 0.688±0.26 N/A 0.012±0.00 N/A N/A 0.003±0.00 0.006±0.00 N/A 0.048±0.03 0.006±0.00 0.557±0.30
ENSMUSG00000081217 ENSMUST00000118845 N/A N/A 0.183±0.05 N/A 0.270±0.00 N/A N/A N/A N/A N/A N/A 0.618±0.17 0.038±0.01 N/A
ENSMUSG00000081803 ENSMUST00000117707 N/A N/A 0.213±0.00 N/A N/A N/A N/A 0.489±0.22 N/A 0.452±0.01 N/A 0.890±0.43 0.164±0.15 0.453±0.00
ENSMUSG00000086426 ENSMUST00000139874 0.493±0.06 N/A 0.057±0.00 N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A 0.290±0.05 N/A N/A

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