C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeo box B5b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000076161 hoxb5b-001 ENSDARG00000054030 7955 + 12:28700690-28702766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000076161
Transcript ID Brain Heart Kidney Muscle
ENSDART00000076161 1.255±0.54 0.067±0.00 1.894±0.94 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W8 CIL_0000W8_0002 CGP 12:28698170-28702766

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049272 Hoxb5-001 protein_coding Mus_musculus 0 252
ENSMUST00000190470 Hoxb5-002 retained_intron Mus_musculus 0.0000000001 73

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