C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000W8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010630-ENSDARG00000013057 CGP 7955 3:23994945-24001336
GeneTranscriptPositionBiotype
ENSDARG00000010630 (hoxb6a)
homeo box B6a 		ENSDART00000024256 (hoxb6a-001) 23994945-23996987 protein_coding
ENSDARG00000013057 (hoxb5a)
homeo box B5a 		ENSDART00000025449 (hoxb5a-001) 23998932-24001336 protein_coding
CIL_0000W8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026513-ENSDARG00000054030 CGP 7955 12:28698170-28702766
GeneTranscriptPositionBiotype
ENSDARG00000026513 (hoxb6b)
homeo box B6b 		ENSDART00000025966 (hoxb6b-001) 28698170-28699799 protein_coding
ENSDARG00000054030 (hoxb5b)
homeo box B5b 		ENSDART00000076161 (hoxb5b-001) 28700690-28702766 protein_coding
CIL_0000W8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000690-ENSMUSG00000038700 CGP 10090 11:96292476-96306121
GeneTranscriptPositionBiotype
ENSMUSG00000000690 (Hoxb6)
homeobox B6 		ENSMUST00000000704 (Hoxb6-201) 96299171-96301568 protein_coding
ENSMUST00000173432 (Hoxb6-001) 96292476-96301569 protein_coding
ENSMUSG00000038700 (Hoxb5)
homeobox B5 		ENSMUST00000049272 (Hoxb5-001) 96303512-96306120 protein_coding
ENSMUST00000190470 (Hoxb5-002) 96303336-96306121 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000W8_0001ENSDARG00000010630ENSDART00000024256ENSDARG00000013057ENSDART00000025449CIL_0000W8_0002ENSDARG00000026513ENSDART00000025966ENSDARG00000054030ENSDART00000076161CIL_0000W8_0003ENSMUSG00000000690ENSMUST00000000704ENSMUST00000173432ENSMUSG00000038700ENSMUST00000049272ENSMUST00000190470
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000W8_0001ENSDARG00000010630ENSDART00000024256ENSDARG00000013057ENSDART00000025449CIL_0000W8_0002ENSDARG00000026513ENSDART00000025966ENSDARG00000054030ENSDART00000076161CIL_0000W8_0003ENSMUSG00000000690ENSMUST00000000704ENSMUST00000173432ENSMUSG00000038700ENSMUST00000049272ENSMUST00000190470
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010630 ENSDART00000024256 N/A N/A N/A 0.645±0.26 N/A N/A 0.347±0.15 6.621±3.36 N/A N/A 2.807±0.00 N/A N/A N/A
ENSDARG00000013057 ENSDART00000025449 N/A N/A N/A 0.842±0.18 N/A N/A 0.262±0.16 1.792±0.73 0.152±0.00 N/A 0.833±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026513 ENSDART00000025966 N/A N/A N/A 0.351±0.18 N/A N/A N/A 0.193±0.04 N/A N/A 0.362±0.00 N/A N/A N/A
ENSDARG00000054030 ENSDART00000076161 N/A N/A N/A 1.255±0.54 N/A N/A 0.067±0.00 1.894±0.94 N/A N/A 0.045±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000690 ENSMUST00000000704 5.109±1.49 31.959±4.08 N/A 1.297±1.06 4.724±1.30 2.963±0.77 0.050±0.00 12.081±2.86 0.032±0.02 1.663±0.88 0.352±0.17 4.178±2.03 0.330±0.19 0.476±0.00
ENSMUST00000173432 4.997±3.74 51.146±25.55 4.062±0.30 0.707±0.95 3.487±1.71 5.838±2.20 0.046±0.00 16.561±4.95 0.081±0.06 1.832±0.82 0.293±0.15 10.506±5.23 0.248±0.22 0.911±0.61
ENSMUSG00000038700 ENSMUST00000049272 3.088±0.05 18.432±2.30 N/A 8.017±6.70 2.140±0.99 4.423±0.51 0.082±0.02 2.897±0.28 0.228±0.06 6.557±1.16 0.206±0.11 3.082±1.04 0.189±0.07 0.199±0.13
ENSMUST00000190470 0.412±0.01 2.726±0.22 N/A N/A 0.284±0.14 0.745±0.15 N/A 0.545±0.01 0.026±0.00 N/A 0.067±0.03 0.608±0.23 0.105±0.05 0.019±0.00

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