C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Fraser syndrome 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000076845 fras1-201 ENSDARG00000054619 7955 + 5:40486956-40686201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleENSDART00000076845
Transcript ID Liver Muscle
ENSDART00000076845 0.020±0.00 0.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051W CIL_00051W_0001 CGP 5:40425682-40687225
CIL_000522 CIL_000522_0001 CGP 5:40486956-40696080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0007154 IEA cell communication
GO:0007492 IMP endoderm development
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0033333 IMP fin development
GO:0033334 IMP fin morphogenesis
GO:0048703 IMP embryonic viscerocranium morphogenesis
GO:0071711 IMP basement membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000512123 FRAS1-008 protein_coding Homo_sapiens 0 2106

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