C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fraser extracellular matrix complex subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512123 FRAS1-008 ENSG00000138759 9606 + 4:78438668-78544269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000512123
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000512123 0.423±0.00 1.747±0.00 0.376±0.00 0.173±0.00 0.812±0.26 0.095±0.03 2.003±1.54 0.041±0.01 1.460±0.67 0.757±0.00 0.727±0.46 2.176±1.37 0.364±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051W CIL_00051W_0002 CGP 4:77862520-78544269
CIL_000522 CIL_000522_0002 CGP 4:78057570-78610451

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007154 IEA cell communication
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036019 Fras1-201 protein_coding Mus_musculus 0 7465
ENSDART00000076845 fras1-201 protein_coding Danio_rerio 0 2106
ENSDART00000137112 fras1-001 protein_coding Danio_rerio 0 2106
ENSDART00000097856 fras1-202 protein_coding Danio_rerio 0 2045

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