C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000077895 rnf7-001 ENSDARG00000055524 7955 - 18:40157300-40166135 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077895
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077895 66.755±4.47 51.229±32.08 39.613±0.00 5.549±0.00 43.985±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273480 RNF7-001 protein_coding Homo_sapiens 0 283
ENST00000393000 RNF7-002 protein_coding Homo_sapiens 0 254
ENST00000477012 RNF7-003 nonsense_mediated_decay Homo_sapiens 1e-21 108
ENST00000477393 RNF7-004 nonsense_mediated_decay Homo_sapiens 1e-20 104
ENST00000480908 RNF7-007 protein_coding Homo_sapiens 1e-20 104
ENST00000498828 RNF7-006 retained_intron Homo_sapiens 9e-22 108

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