C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477393 RNF7-004 ENSG00000114125 9606 + 3:141738319-141745517 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000477393
Transcript ID Ovary Testis
ENST00000477393 6.765±0.00 15.372±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0001 VISTA 3:141560621-142161968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057500 Rnf7-001 protein_coding Mus_musculus 0 276
ENSMUST00000054760 Gm7075-201 protein_coding Mus_musculus 0 259
ENSMUST00000121986 Gm12362-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000071301 Rnf7-002 protein_coding Mus_musculus 0 254
ENSMUST00000128955 Rnf7-003 processed_transcript Mus_musculus 0 248
ENSMUST00000151704 Gm6152-001 processed_pseudogene Mus_musculus 0 215
ENSDART00000077895 rnf7-001 protein_coding Danio_rerio 1e-20 104

Loading