C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000079928 galnt7-001 ENSDARG00000057303 7955 + 1:38552081-38576180 protein_coding

Danio rerio EnsemblZv9

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000079928
Transcript ID Brain Heart Liver Muscle
ENSDART00000079928 12.868±2.57 8.839±0.00 0.281±0.00 2.544±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007Y CIL_00007Y_0001 CGP 1:38161657-38580268
CIL_00007T CIL_00007T_0001 CGP 1:38552081-38581153

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265000 GALNT7-001 protein_coding Homo_sapiens 0 641
ENST00000505308 GALNT7-003 protein_coding Homo_sapiens 0 603
ENST00000506317 GALNT7-006 retained_intron Homo_sapiens 0 261

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