C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paired-like homeobox 2bb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000080682 phox2bb-001 ENSDARG00000071751 7955 - 14:14824702-14827831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000080682
Transcript ID Brain
ENSDART00000080682 0.081±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028N CIL_00028N_0001 CGP 14:14496213-14857579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding
GO:0048484 IMP enteric nervous system development
GO:0061549 IMP sympathetic ganglion development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012664 Phox2b-001 protein_coding Mus_musculus 0 584
ENSMUST00000174251 Phox2b-002 protein_coding Mus_musculus 0 451
ENST00000226382 PHOX2B-001 protein_coding Homo_sapiens 0 573
ENST00000298231 PHOX2A-001 protein_coding Homo_sapiens 0 222
ENST00000544057 PHOX2A-003 processed_transcript Homo_sapiens 0 217

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