C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 1a polypeptide, tandem duplicate 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000081047 atp1a1a.1-001 ENSDARG00000002791 7955 + 1:1468926-1488350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000081047
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000081047 28.316±2.54 170.890±128.00 62.875±62.05 45.981±0.00 34.386±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003143 IMP embryonic heart tube morphogenesis
GO:0005391 IMP sodium:potassium-exchanging ATPase activity
GO:0005524 IEA ATP binding
GO:0005887 NAS integral to plasma membrane
GO:0006200 IMP ATP catabolic process
GO:0006754 IEA ATP biosynthetic process
GO:0006812 IEA cation transport
GO:0007368 IMP determination of left/right symmetry
GO:0007420 IMP brain development
GO:0010172 IMP embryonic body morphogenesis
GO:0015077 IEA monovalent inorganic cation transmembrane transporter activity
GO:0015672 IEA monovalent inorganic cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0019829 IEA cation-transporting ATPase activity
GO:0030198 IMP extracellular matrix organization
GO:0030916 IMP otic vesicle formation
GO:0030917 IMP midbrain-hindbrain boundary development
GO:0035050 IMP embryonic heart tube development
GO:0035051 IMP cardiocyte differentiation
GO:0035725 IMP sodium ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0048840 IMP otolith development
GO:0060974 IMP cell migration involved in heart formation
GO:0071599 IMP otic vesicle development
GO:0071805 IMP potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085913 Atp1a2-001 protein_coding Mus_musculus 0 1607
ENSMUST00000097464 Atp1a2-004 protein_coding Mus_musculus 0 1491
ENSMUST00000111243 Atp1a4-001 protein_coding Mus_musculus 0 745
ENSMUST00000131751 Atp1a2-003 retained_intron Mus_musculus 0 1321
ENSMUST00000137679 Atp1a2-002 protein_coding Mus_musculus 0 848
ENSMUST00000139528 Igsf8-004 protein_coding Mus_musculus 7e-19 100
ENSMUST00000155363 Igsf8-005 retained_intron Mus_musculus 6e-19 100
ENST00000302102 ATP1A3-001 protein_coding Homo_sapiens 0 1786
ENST00000441343 ATP1A3-002 non_stop_decay Homo_sapiens 0 1755
ENST00000543770 ATP1A3-007 protein_coding Homo_sapiens 0 1786
ENST00000545399 ATP1A3-008 protein_coding Homo_sapiens 0 1786
ENST00000602133 ATP1A3-005 protein_coding Homo_sapiens 0 1786

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