C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 3 polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441343 ATP1A3-002 ENSG00000105409 9606 - 19:41966582-41994214 non_stop_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLungOvaryPlacentaTestisENST00000441343
Transcript ID Adrenal Lung Ovary Placenta Testis
ENST00000441343 0.598±0.00 0.207±0.00 0.227±0.12 0.113±0.06 34.882±22.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030U CIL_00030U_0001 CGP 19:41956681-41997497
CIL_0003YN CIL_0003YN_0001 CGP 19:41966582-42069498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005391 IEA sodium:potassium-exchanging ATPase activity
GO:0005524 IEA ATP binding
GO:0006813 IEA potassium ion transport
GO:0006814 IEA sodium ion transport
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102858 Atp1a3-002 protein_coding Mus_musculus 0 4133
ENSMUST00000080882 Atp1a3-001 protein_coding Mus_musculus 0 4124
ENSDART00000104950 atp1a3a-001 protein_coding Danio_rerio 0 2477
ENSMUST00000085913 Atp1a2-001 protein_coding Mus_musculus 0 2401
ENSMUST00000097464 Atp1a2-004 protein_coding Mus_musculus 0 2226
ENSMUST00000131751 Atp1a2-003 retained_intron Mus_musculus 0 1997
ENSMUST00000146595 Atp1a3-003 retained_intron Mus_musculus 0 1986
ENSDART00000124130 atp1a3b-201 protein_coding Danio_rerio 0 1969
ENSDART00000149975 atp1a3b-001 protein_coding Danio_rerio 0 1969
ENSMUST00000036493 Atp1a1-001 protein_coding Mus_musculus 0 1941
ENSDART00000093298 atp1a2a-201 protein_coding Danio_rerio 0 1797
ENSDART00000011188 atp1a2a-001 protein_coding Danio_rerio 0 1797
ENSDART00000081047 atp1a1a.1-001 protein_coding Danio_rerio 0 1755
ENSMUST00000111243 Atp1a4-001 protein_coding Mus_musculus 0 1472
ENSMUST00000137679 Atp1a2-002 protein_coding Mus_musculus 0 1304
ENSMUST00000154077 Atp1a3-004 processed_transcript Mus_musculus 0 811
ENSMUST00000007340 Atp12a-201 protein_coding Mus_musculus 0 697
ENSMUST00000125444 Atp1a3-005 retained_intron Mus_musculus 0 544
ENSDART00000135994 atp1a1a.1-002 processed_transcript Danio_rerio 0 379

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