C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 2 polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131751 Atp1a2-003 ENSMUSG00000007097 10090 - 1:172274543-172298064 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungMuscleOvaryTestisENSMUST00000131751
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Testis
ENSMUST00000131751 21.271±0.98 12.636±2.09 24.149±21.03 21.240±6.88 23.458±0.00 3.636±0.20 10.713±0.81 76.882±22.28 10.795±3.99 3.191±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I6 CIL_0005I6_0002 CGP 1:172261641-172319841

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104950 atp1a3a-001 protein_coding Danio_rerio 0 1604
ENSDART00000124130 atp1a3b-201 protein_coding Danio_rerio 0 1550
ENSDART00000149975 atp1a3b-001 protein_coding Danio_rerio 0 1550
ENSDART00000093298 atp1a2a-201 protein_coding Danio_rerio 0 1476
ENSDART00000011188 atp1a2a-001 protein_coding Danio_rerio 0 1476
ENSDART00000081047 atp1a1a.1-001 protein_coding Danio_rerio 0 1321
ENSDART00000006013 atp1a1a.5-001 protein_coding Danio_rerio 0 883
ENSDART00000149502 atp1a3b-003 retained_intron Danio_rerio 0 383
ENSDART00000137184 atp1a1a.1-005 processed_transcript Danio_rerio 0 259
ENST00000262623 ATP4A-001 protein_coding Homo_sapiens 0 623
ENST00000302102 ATP1A3-001 protein_coding Homo_sapiens 0 1997
ENST00000361216 ATP1A2-001 protein_coding Homo_sapiens 0 3476
ENST00000368081 ATP1A4-001 protein_coding Homo_sapiens 0 1585
ENST00000392233 ATP1A2-003 protein_coding Homo_sapiens 0 3472
ENST00000418334 ATP1A4-002 processed_transcript Homo_sapiens 0 721
ENST00000441343 ATP1A3-002 non_stop_decay Homo_sapiens 0 1997
ENST00000447527 ATP1A2-008 protein_coding Homo_sapiens 0 2274
ENST00000463989 ATP1A2-005 retained_intron Homo_sapiens 0 492
ENST00000468587 ATP1A2-006 retained_intron Homo_sapiens 0 475
ENST00000469023 ATP1A4-003 retained_intron Homo_sapiens 0 737
ENST00000472488 ATP1A2-002 retained_intron Homo_sapiens 0 3500
ENST00000477338 ATP1A4-004 nonsense_mediated_decay Homo_sapiens 0 1495
ENST00000478587 ATP1A2-007 retained_intron Homo_sapiens 4e-19 99
ENST00000543770 ATP1A3-007 protein_coding Homo_sapiens 0 1997
ENST00000545399 ATP1A3-008 protein_coding Homo_sapiens 0 1997
ENST00000592131 ATP4A-002 retained_intron Homo_sapiens 0 211
ENST00000602133 ATP1A3-005 protein_coding Homo_sapiens 0 1997

Loading