C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: active BCR-related
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000082965 ENSDARG00000059587 7955 + 5:65553616-65606596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000082965
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000082965 6.571±7.23 6.159±1.85 2.309±0.00 0.197±0.00 1.306±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065028 Abr-006 protein_coding Mus_musculus 0 455
ENSMUST00000072740 Abr-001 protein_coding Mus_musculus 0 632
ENSMUST00000094012 Abr-002 protein_coding Mus_musculus 0 632
ENSMUST00000108407 Abr-201 protein_coding Mus_musculus 0 632
ENSMUST00000108408 Abr-003 protein_coding Mus_musculus 0 632
ENSMUST00000130364 Abr-007 nonsense_mediated_decay Mus_musculus 0 202
ENSMUST00000141442 Abr-010 retained_intron Mus_musculus 0 444
ENST00000291107 ABR-003 protein_coding Homo_sapiens 0 654
ENST00000302538 ABR-001 protein_coding Homo_sapiens 0 654
ENST00000536794 ABR-026 protein_coding Homo_sapiens 0 483
ENST00000544583 ABR-004 protein_coding Homo_sapiens 0 654
ENST00000571945 ABR-025 protein_coding Homo_sapiens 0 283
ENST00000573667 ABR-027 retained_intron Homo_sapiens 0 318
ENST00000574437 ABR-002 protein_coding Homo_sapiens 0 654
ENST00000576964 ABR-020 processed_transcript Homo_sapiens 0 350
ENST00000611021 ABR-204 protein_coding Homo_sapiens 0 649
ENST00000612118 ABR-205 protein_coding Homo_sapiens 0 649
ENST00000613981 ABR-202 protein_coding Homo_sapiens 0 649
ENST00000619569 ABR-207 protein_coding Homo_sapiens 0 477
ENST00000620170 ABR-203 protein_coding Homo_sapiens 0 477
ENST00000620619 ABR-208 protein_coding Homo_sapiens 0 649

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