C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domain family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000086434 tmcc2-001 ENSDARG00000046007 7955 - 22:566978-575185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000086434
Transcript ID Brain Liver Muscle
ENSDART00000086434 0.392±0.12 0.051±0.00 1.134±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032222 Tmcc1-003 protein_coding Mus_musculus 0 198
ENSMUST00000045473 Tmcc2-001 protein_coding Mus_musculus 0 499
ENSMUST00000088896 Tmcc1-001 protein_coding Mus_musculus 0 198
ENSMUST00000132435 Tmcc2-002 protein_coding Mus_musculus 0 499
ENSMUST00000138717 Tmcc2-004 retained_intron Mus_musculus 0 392
ENSMUST00000142609 Tmcc2-003 protein_coding Mus_musculus 0 499
ENSMUST00000172510 Tmcc1-008 protein_coding Mus_musculus 0 198
ENSMUST00000173110 Tmcc1-004 nonsense_mediated_decay Mus_musculus 0 198
ENST00000329800 TMCC2-003 protein_coding Homo_sapiens 0 560
ENST00000330675 TMCC2-004 protein_coding Homo_sapiens 0 560
ENST00000358024 TMCC2-001 protein_coding Homo_sapiens 0 560
ENST00000367159 TMCC2-005 protein_coding Homo_sapiens 0 405
ENST00000468846 TMCC2-007 processed_transcript Homo_sapiens 0 436
ENST00000481950 TMCC2-006 processed_transcript Homo_sapiens 0 560
ENST00000495538 TMCC2-002 processed_transcript Homo_sapiens 0 560
ENST00000545499 TMCC2-201 protein_coding Homo_sapiens 0 560

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