C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pumilio homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000086578 pum2-201 ENSDARG00000061040 7955 - 20:6140108-6177488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverMuscleENSDART00000086578
Transcript ID Kidney Liver Muscle
ENSDART00000086578 0.586±0.00 0.105±0.00 0.097±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030315 Pum1-001 protein_coding Mus_musculus 0 292
ENSMUST00000097862 Pum1-004 protein_coding Mus_musculus 0 292
ENSMUST00000097864 Pum1-003 protein_coding Mus_musculus 0 292
ENSMUST00000105991 Pum1-201 protein_coding Mus_musculus 0 292
ENSMUST00000105992 Pum1-202 protein_coding Mus_musculus 0 292
ENST00000257075 PUM1-001 protein_coding Homo_sapiens 0 285
ENST00000373741 PUM1-002 protein_coding Homo_sapiens 0 285
ENST00000373742 PUM1-011 protein_coding Homo_sapiens 0 285
ENST00000373747 PUM1-004 protein_coding Homo_sapiens 0 285
ENST00000424085 PUM1-014 protein_coding Homo_sapiens 0 285
ENST00000426105 PUM1-010 protein_coding Homo_sapiens 0 285
ENST00000440538 PUM1-013 protein_coding Homo_sapiens 0 285
ENST00000498419 PUM1-005 protein_coding Homo_sapiens 0 285
ENST00000525843 PUM1-012 protein_coding Homo_sapiens 0 285
ENST00000525997 PUM1-022 protein_coding Homo_sapiens 1e-29 134
ENST00000529846 PUM1-024 protein_coding Homo_sapiens 1e-30 137
ENST00000530669 PUM1-023 nonsense_mediated_decay Homo_sapiens 0 226

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