C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000089445 agap1-001 ENSDARG00000062123 7955 - 6:15964316-16312330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000089445
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000089445 4.905±0.00 2.133±1.18 0.237±0.00 0.442±0.00 2.471±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KS CIL_0007KS_0004 UCNEbase 6:15954156-16080201

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0032312 IEA regulation of ARF GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027521 Agap1-001 protein_coding Mus_musculus 0 1537
ENSMUST00000074945 Agap1-003 protein_coding Mus_musculus 0 763
ENSMUST00000190096 Agap1-002 protein_coding Mus_musculus 0 981

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