C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074945 Agap1-003 ENSMUSG00000055013 10090 + 1:89580236-89895277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074945 3.206±1.29 1.271±0.32 0.822±0.00 12.783±5.67 3.084±1.03 3.078±0.00 1.540±0.54 1.275±0.03 0.134±0.01 2.351±0.10 1.299±0.16 3.386±2.05 1.045±0.27 0.125±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R3 CIL_0003R3_0002 CGP 1:89070415-89897617
CIL_0007U0 CIL_0007U0_0002 VISTA 1:89413750-90014911
CIL_0003RE CIL_0003RE_0002 CGP 1:89454806-89931179

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089445 agap1-001 protein_coding Danio_rerio 0 763
ENST00000304032 AGAP1-001 protein_coding Homo_sapiens 0 2097
ENST00000336665 AGAP1-002 protein_coding Homo_sapiens 0 3432
ENST00000402604 AGAP1-006 protein_coding Homo_sapiens 0 381
ENST00000409457 AGAP1-003 protein_coding Homo_sapiens 0 1022
ENST00000409538 AGAP1-004 protein_coding Homo_sapiens 0 4346
ENST00000418654 AGAP1-007 protein_coding Homo_sapiens 0 652
ENST00000427215 RP11-545A16.3-001 processed_pseudogene Homo_sapiens 0 872
ENST00000428334 AGAP1-201 protein_coding Homo_sapiens 0 2097
ENST00000447378 RP11-549A6.1-001 processed_pseudogene Homo_sapiens 0 865
ENST00000448025 AGAP1-010 protein_coding Homo_sapiens 0 259
ENST00000453371 AGAP1-005 processed_transcript Homo_sapiens 0 1572
ENST00000466575 AGAP1-008 retained_intron Homo_sapiens 0 459
ENST00000482882 AGAP1-009 retained_intron Homo_sapiens 0 350
ENST00000614409 AGAP1-202 protein_coding Homo_sapiens 0 3432
ENST00000619456 AGAP1-203 protein_coding Homo_sapiens 0 1022

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