C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, alpha 1R subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000089971 cacna1r-201 ENSDARG00000062346 7955 + 8:15169362-15348604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000089971
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000089971 7.302±5.76 0.026±0.01 0.146±0.09 0.052±0.00 0.451±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004214 Cacna1e-201 protein_coding Mus_musculus 0 763
ENSMUST00000121390 Cacna1a-001 protein_coding Mus_musculus 0 215
ENSMUST00000122053 Cacna1a-002 protein_coding Mus_musculus 0 215
ENSMUST00000187541 Cacna1e-001 protein_coding Mus_musculus 0 763

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