C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, R type, alpha 1E subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187541 Cacna1e-001 ENSMUSG00000004110 10090 - 1:154390731-154726356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000187541
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000187541 0.602±0.00 0.039±0.00 0.015±0.00 4.260±2.05 0.459±0.00 0.015±0.00 0.050±0.03 0.023±0.01 0.161±0.04 0.008±0.00 0.193±0.09 0.013±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000134656 CACNA1E (2 of 2)-001 protein_coding Danio_rerio 0 1184
ENSDART00000089971 cacna1r-201 protein_coding Danio_rerio 0 763
ENSDART00000132899 cacna1r-002 protein_coding Danio_rerio 0 763
ENST00000357570 CACNA1E-201 protein_coding Homo_sapiens 0 7914
ENST00000358338 CACNA1E-202 protein_coding Homo_sapiens 0 6189
ENST00000360108 CACNA1E-006 protein_coding Homo_sapiens 0 4586
ENST00000360228 CACNA1A-001 protein_coding Homo_sapiens 0 1020
ENST00000367567 CACNA1E-203 protein_coding Homo_sapiens 0 9546
ENST00000367570 CACNA1E-001 protein_coding Homo_sapiens 0 9701
ENST00000367573 CACNA1E-003 protein_coding Homo_sapiens 0 7949
ENST00000524607 CACNA1E-004 protein_coding Homo_sapiens 0 1978
ENST00000533229 CACNA1E-005 retained_intron Homo_sapiens 0 1816
ENST00000573710 CACNA1A-002 protein_coding Homo_sapiens 0 959
ENST00000585802 CACNA1A-012 protein_coding Homo_sapiens 0 891
ENST00000587525 CACNA1A-013 protein_coding Homo_sapiens 0 542
ENST00000614285 CACNA1A-201 protein_coding Homo_sapiens 0 1014
ENST00000621551 CACNA1E-204 protein_coding Homo_sapiens 0 7943
ENST00000621791 CACNA1E-002 protein_coding Homo_sapiens 0 6189

Loading