C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, R type, alpha 1E subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004214 Cacna1e-201 ENSMUSG00000004110 10090 - 1:154392519-154725920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004214
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004214 0.262±0.06 0.026±0.01 0.169±0.03 0.175±0.05 0.023±0.00 0.055±0.00 0.018±0.01 0.066±0.00 0.005±0.00 0.232±0.07 0.015±0.01 0.075±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IMP behavioral fear response
GO:0002027 IMP regulation of heart rate
GO:0005245 IMP voltage-gated calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005886 IBA plasma membrane
GO:0005891 TAS voltage-gated calcium channel complex
GO:0006816 IMP calcium ion transport
GO:0007268 IBA synaptic transmission
GO:0007626 IMP locomotory behavior
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0008542 IMP visual learning
GO:0019226 IMP transmission of nerve impulse
GO:0019233 IMP sensory perception of pain
GO:0030317 IMP sperm motility
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042593 IMP glucose homeostasis
GO:0042596 IMP fear response
GO:0048265 IMP response to pain
GO:0048266 IMP behavioral response to pain
GO:0050877 IMP neurological system process
GO:0061178 IMP regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0070509 IBA calcium ion import
GO:0070588 IMP calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential
GO:0090273 IMP regulation of somatostatin secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000134656 CACNA1E (2 of 2)-001 protein_coding Danio_rerio 0 1184
ENSDART00000089971 cacna1r-201 protein_coding Danio_rerio 0 763
ENSDART00000132899 cacna1r-002 protein_coding Danio_rerio 0 763
ENST00000357570 CACNA1E-201 protein_coding Homo_sapiens 0 7891
ENST00000358338 CACNA1E-202 protein_coding Homo_sapiens 0 6156
ENST00000360108 CACNA1E-006 protein_coding Homo_sapiens 0 4553
ENST00000360228 CACNA1A-001 protein_coding Homo_sapiens 0 1026
ENST00000367567 CACNA1E-203 protein_coding Homo_sapiens 0 9513
ENST00000367570 CACNA1E-001 protein_coding Homo_sapiens 0 9520
ENST00000367573 CACNA1E-003 protein_coding Homo_sapiens 0 7915
ENST00000524607 CACNA1E-004 protein_coding Homo_sapiens 0 1978
ENST00000533229 CACNA1E-005 retained_intron Homo_sapiens 0 1622
ENST00000573710 CACNA1A-002 protein_coding Homo_sapiens 0 965
ENST00000585802 CACNA1A-012 protein_coding Homo_sapiens 0 891
ENST00000587525 CACNA1A-013 protein_coding Homo_sapiens 0 542
ENST00000614285 CACNA1A-201 protein_coding Homo_sapiens 0 1020
ENST00000621551 CACNA1E-204 protein_coding Homo_sapiens 0 7910
ENST00000621791 CACNA1E-002 protein_coding Homo_sapiens 0 6156

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