C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spectrin repeat containing, nuclear envelope 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000091828 syne1b-201 ENSDARG00000063068 7955 - 17:7684964-7987928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000091828
Transcript ID Brain Heart Kidney Muscle
ENSDART00000091828 4.944±3.83 0.372±0.00 4.060±0.00 0.327±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QH CIL_0002QH_0001 CGP 17:7684964-8019200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0009190 IEA cyclic nucleotide biosynthetic process
GO:0016021 IEA integral to membrane
GO:0016849 IEA phosphorus-oxygen lyase activity
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095899 Syne1-202 protein_coding Mus_musculus 0 608

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