C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063068-ENSDARG00000088546 CGP 7955 17:7684964-8019200
GeneTranscriptPositionBiotype
ENSDARG00000063068 (syne1b)
spectrin repeat containing, nuclear envelope 1b 		ENSDART00000091828 (syne1b-201) 7684964-7987928 protein_coding
ENSDART00000148520 (syne1b-001) 7684975-8013428 protein_coding
ENSDART00000148604 (syne1b-002) 7685308-7701267 protein_coding
ENSDARG00000088546 (MYCT1 (2 of 2))
myc target 1 		ENSDART00000131200 (MYCT1 (2 of 2)-001) 8016046-8019200 protein_coding
CIL_0002QH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131018-ENSG00000120279 CGP 9606 6:152121684-152724567
GeneTranscriptPositionBiotype
ENSG00000091831 (ESR1)
estrogen receptor 1 		ENST00000206249 (ESR1-001) 151807551-152103274 protein_coding
ENST00000338799 (ESR1-002) 151804431-152099053 protein_coding
ENST00000404742 (ESR1-004) 151690496-151808166 protein_coding
ENST00000406599 (ESR1-009) 151807679-152098978 protein_coding
ENST00000415488 (ESR1-010) 151880657-152061059 protein_coding
ENST00000427531 (ESR1-008) 151809107-152129619 protein_coding
ENST00000440973 (ESR1-201) 151690496-152103274 protein_coding
ENST00000443427 (ESR1-202) 151807319-152103274 protein_coding
ENST00000446550 (ESR1-007) 151807196-151808259 protein_coding
ENST00000456483 (ESR1-203) 151807679-152098978 protein_coding
ENST00000473497 (ESR1-005) 151656691-151807857 processed_transcript
ENST00000482101 (ESR1-003) 151944172-151984165 processed_transcript
ENST00000488573 (ESR1-006) 151808105-151811278 processed_transcript
ENSG00000120279 (MYCT1)
myc target 1 		ENST00000367245 (MYCT1-001) 152697895-152724567 protein_coding
ENST00000529453 (MYCT1-002) 152697897-152723284 protein_coding
ENST00000532295 (MYCT1-003) 152697961-152724501 protein_coding
ENSG00000218792 (HSPD1P16)
heat shock 60kDa protein 1 (chaperonin) pseudogene 16 		ENST00000402302 (HSPD1P16-001) 152705735-152706128 processed_pseudogene
ENSG00000226193 (RP3-398G3.5)
 ENST00000458194 (RP3-398G3.5-001) 152402398-152404966 antisense
ENSG00000233464 (NANOGP11)
Nanog homeobox pseudogene 11 		ENST00000449282 (NANOGP11-001) 152545930-152546984 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QH_0001ENSDARG00000063068ENSDART00000091828ENSDART00000148520ENSDART00000148604ENSDARG00000088546ENSDART00000131200CIL_0002QH_0002ENSG00000091831ENST00000206249ENST00000338799ENST00000404742ENST00000406599ENST00000415488ENST00000427531ENST00000440973ENST00000443427ENST00000446550ENST00000456483ENST00000473497ENST00000482101ENST00000488573ENSG00000120279ENST00000367245ENST00000529453ENST00000532295ENSG00000218792ENST00000402302ENSG00000226193ENST00000458194ENSG00000233464ENST00000449282
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QH_0001ENSDARG00000063068ENSDART00000091828ENSDART00000148520ENSDART00000148604ENSDARG00000088546ENSDART00000131200CIL_0002QH_0002ENSG00000091831ENST00000206249ENST00000338799ENST00000404742ENST00000406599ENST00000415488ENST00000427531ENST00000440973ENST00000443427ENSG00000120279ENST00000367245ENST00000529453ENST00000532295ENSG00000218792ENST00000402302ENSG00000226193ENST00000458194ENSG00000233464ENST00000449282
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063068 ENSDART00000091828 N/A N/A N/A 4.944±3.83 N/A N/A 0.372±0.00 4.060±0.00 N/A N/A 0.327±0.00 N/A N/A N/A
ENSDART00000148520 N/A N/A N/A 0.513±0.00 N/A N/A N/A 2.558±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000148604 N/A N/A N/A 44.841±14.39 N/A N/A 6.929±2.31 N/A 0.265±0.00 N/A 4.324±0.00 N/A N/A N/A
ENSDARG00000088546 ENSDART00000131200 N/A N/A N/A 0.927±0.32 N/A N/A 9.600±5.64 1.468±0.81 N/A N/A 0.678±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091831 ENST00000206249 0.563±0.00 0.217±0.00 N/A N/A N/A N/A N/A N/A N/A 0.338±0.00 N/A 4.120±3.84 N/A N/A
ENST00000338799 N/A N/A N/A N/A 0.536±0.00 N/A N/A N/A N/A 0.418±0.00 N/A N/A N/A N/A
ENST00000404742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.300±0.00 N/A
ENST00000406599 N/A N/A N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000415488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.610±0.00 N/A
ENST00000427531 0.125±0.00 0.273±0.00 N/A 0.187±0.06 0.328±0.00 0.410±0.00 0.142±0.00 N/A 0.414±0.00 N/A 0.029±0.00 0.024±0.00 N/A N/A
ENST00000440973 N/A N/A N/A N/A 0.483±0.00 N/A 0.088±0.00 2.888±0.00 1.991±0.00 0.178±0.00 N/A 1.506±1.07 N/A N/A
ENST00000443427 0.276±0.00 N/A N/A N/A 0.935±0.00 0.266±0.00 0.188±0.00 0.775±0.00 0.449±0.00 N/A 0.807±0.00 0.641±0.40 0.249±0.03 N/A
ENST00000446550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120279 ENST00000367245 10.277±0.00 2.174±0.00 0.367±0.00 0.229±0.09 1.833±1.54 1.889±0.53 1.493±0.56 0.687±0.01 0.665±0.04 4.133±2.95 0.879±0.00 0.800±0.48 3.055±1.18 0.974±0.53
ENST00000529453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 2.713±0.00 N/A
ENST00000532295 16.750±0.00 5.950±0.00 0.646±0.00 0.421±0.06 4.601±2.70 5.547±0.00 1.663±1.07 2.128±0.35 1.234±0.05 12.735±0.00 2.131±0.00 1.509±0.77 3.060±1.15 1.719±1.44
ENSG00000218792 ENST00000402302 0.257±0.00 0.029±0.00 N/A N/A 0.028±0.00 N/A 0.073±0.02 N/A N/A 0.575±0.00 N/A N/A N/A N/A
ENSG00000226193 ENST00000458194 N/A N/A N/A N/A N/A N/A N/A 0.177±0.00 0.858±0.00 N/A N/A N/A N/A 0.033±0.00
ENSG00000233464 ENST00000449282 N/A N/A 0.093±0.00 0.128±0.00 N/A N/A 0.125±0.00 N/A 0.322±0.00 N/A N/A N/A N/A N/A

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