C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 8 (sodium-calcium exchanger), member 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000097701 slc8a2b-202 ENSDARG00000040625 7955 + 15:41632514-41699628 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000097701
Transcript ID Heart Kidney Muscle
ENSDART00000097701 0.032±0.00 0.053±0.00 0.153±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005432 IEA calcium:sodium antiporter activity
GO:0006816 IEA calcium ion transport
GO:0007154 IEA cell communication
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086538 Slc8a1-201 protein_coding Mus_musculus 4e-21 108
ENSMUST00000163123 Slc8a1-202 protein_coding Mus_musculus 4e-21 108
ENSMUST00000163680 Slc8a1-203 protein_coding Mus_musculus 4e-21 108
ENST00000236877 SLC8A2-001 protein_coding Homo_sapiens 0 789
ENST00000542837 SLC8A2-003 protein_coding Homo_sapiens 0 789

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