C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeo box (H6 family) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000104612 hmx3-001 ENSDARG00000070955 7955 - 17:21620621-21623128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000104612
Transcript ID Brain Heart Kidney Muscle
ENSDART00000104612 1.826±1.29 0.120±0.10 0.235±0.14 0.318±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LX CIL_0007LX_0004 UCNEbase 17:21498898-21643986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283921 HOXA10-001 protein_coding Homo_sapiens 0.000001 60
ENST00000396344 HOXA10-003 protein_coding Homo_sapiens 0.0000006 60
ENST00000519593 HOXA10-006 processed_transcript Homo_sapiens 0.0000003 60
ENST00000521421 HOXA10-005 processed_transcript Homo_sapiens 0.0000005 60
ENST00000524368 HOXA10-004 processed_transcript Homo_sapiens 0.0000004 60
ENST00000613671 HOXA10-201 protein_coding Homo_sapiens 0.0000008 60

Loading