C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeobox A10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524368 HOXA10-004 ENSG00000253293 9606 - 7:27171378-27172963 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMusclePlacentaENST00000524368
Transcript ID Lung Muscle Placenta
ENST00000524368 0.124±0.00 9.179±0.00 3.116±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003PA CIL_0003PA_0001 CGP 7:27153716-27175180
CIL_0006I0 CIL_0006I0_0002 CGP 7:27162435-27180013
CIL_0003P7 CIL_0003P7_0001 CGP 7:27170591-27185223

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121043 Hoxa10-004 protein_coding Mus_musculus 0 887
ENSMUST00000126402 Hoxa10-002 processed_transcript Mus_musculus 0 883
ENSMUST00000125581 Hoxa10-001 protein_coding Mus_musculus 0 883
ENSMUST00000142611 Hoxa10-003 processed_transcript Mus_musculus 0 771
ENSMUST00000174042 Hoxb9-002 protein_coding Mus_musculus 1e-27 128
ENSMUST00000000010 Hoxb9-001 protein_coding Mus_musculus 1e-27 128
ENSDART00000104612 hmx3-001 protein_coding Danio_rerio 0.0000004 60

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