C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP1, GTP-GDP dissociation stimulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109507 RAP1GDS1-201 ENSDARG00000073741 7955 + 7:72254544-72301905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109507
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109507 16.676±14.93 0.995±0.12 0.510±0.00 0.082±0.00 1.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C0 CIL_0005C0_0001 CGP 7:72254544-72354607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098574 Rap1gds1-202 protein_coding Mus_musculus 0 568
ENST00000339360 RAP1GDS1-006 protein_coding Homo_sapiens 0 468
ENST00000408927 RAP1GDS1-001 protein_coding Homo_sapiens 0 468
ENST00000453712 RAP1GDS1-007 protein_coding Homo_sapiens 0 468
ENST00000503745 RAP1GDS1-019 processed_transcript Homo_sapiens 2.94273e-44 182
ENST00000505378 RAP1GDS1-003 retained_intron Homo_sapiens 0 281
ENST00000507303 RAP1GDS1-018 retained_intron Homo_sapiens 0 281
ENST00000508213 RAP1GDS1-011 protein_coding Homo_sapiens 0 222
ENST00000509501 RAP1GDS1-020 protein_coding Homo_sapiens 8e-33 145
ENST00000511212 RAP1GDS1-017 protein_coding Homo_sapiens 2e-38 163
ENST00000511379 RAP1GDS1-014 retained_intron Homo_sapiens 0 230

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