C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005C0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073741-ENSDARG00000086033 CGP 7955 7:72254544-72354607
GeneTranscriptPositionBiotype
ENSDARG00000073741 (RAP1GDS1)
RAP1, GTP-GDP dissociation stimulator 1 		ENSDART00000109507 (RAP1GDS1-201) 72254544-72301905 protein_coding
ENSDARG00000086033 (tspan5a)
tetraspanin 5a 		ENSDART00000075178 (tspan5a-201) 72324505-72354607 protein_coding
ENSDART00000126739 (tspan5a-202) 72315693-72354359 protein_coding
CIL_0005C0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138698-ENSG00000168785 CGP 9606 4:98261384-98658629
GeneTranscriptPositionBiotype
ENSG00000168785 (TSPAN5)
tetraspanin 5 		ENST00000305798 (TSPAN5-001) 98470367-98658629 protein_coding
ENST00000505184 (TSPAN5-004) 98472210-98657692 protein_coding
ENST00000507167 (TSPAN5-010) 98486545-98658294 retained_intron
ENST00000508798 (TSPAN5-002) 98470367-98658570 nonsense_mediated_decay
ENST00000509168 (TSPAN5-007) 98478700-98560233 processed_transcript
ENST00000511651 (TSPAN5-005) 98482062-98657649 protein_coding
ENST00000511753 (TSPAN5-003) 98472345-98485532 retained_intron
ENST00000511800 (TSPAN5-008) 98482101-98657647 nonsense_mediated_decay
ENST00000515287 (TSPAN5-006) 98478717-98657635 protein_coding
ENST00000515440 (TSPAN5-009) 98478685-98658198 nonsense_mediated_decay
ENSG00000242318 (RP11-810D13.1)
 ENST00000485315 (RP11-810D13.1-001) 98409290-98409763 processed_pseudogene
ENSG00000251523 (RP11-724M22.1)
 ENST00000505408 (RP11-724M22.1-001) 98496364-98509935 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005C0_0001ENSDARG00000073741ENSDART00000109507ENSDARG00000086033ENSDART00000075178ENSDART00000126739CIL_0005C0_0002ENSG00000168785ENST00000305798ENST00000505184ENST00000507167ENST00000508798ENST00000509168ENST00000511651ENST00000511753ENST00000511800ENST00000515287ENST00000515440ENSG00000242318ENST00000485315ENSG00000251523ENST00000505408
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005C0_0001ENSDARG00000073741ENSDART00000109507ENSDARG00000086033ENSDART00000075178ENSDART00000126739CIL_0005C0_0002ENSG00000168785ENST00000305798ENST00000505184ENST00000508798ENST00000509168ENST00000511753ENST00000515287ENSG00000242318ENST00000485315ENSG00000251523ENST00000505408
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073741 ENSDART00000109507 N/A N/A N/A 16.676±14.93 N/A N/A 0.995±0.12 0.510±0.00 0.082±0.00 N/A 1.065±0.00 N/A N/A N/A
ENSDARG00000086033 ENSDART00000075178 N/A N/A N/A N/A N/A N/A N/A 4.772±0.00 0.704±0.00 N/A N/A N/A N/A N/A
ENSDART00000126739 N/A N/A N/A 17.632±0.00 N/A N/A 10.825±4.25 4.853±1.39 0.502±0.00 N/A 9.860±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168785 ENST00000305798 N/A 3.138±0.00 N/A 15.092±4.75 0.546±0.00 0.900±0.43 0.293±0.00 0.975±0.61 0.632±0.00 1.404±1.11 N/A 8.047±7.31 2.730±1.23 5.179±0.00
ENST00000505184 N/A N/A N/A 11.890±0.00 0.986±0.00 N/A 1.065±0.00 N/A N/A 1.411±0.00 N/A 3.350±0.00 N/A N/A
ENST00000507167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508798 0.227±0.00 1.495±0.00 N/A 9.370±0.00 N/A 0.645±0.00 0.447±0.00 0.799±0.00 0.135±0.00 N/A 0.223±0.00 2.950±0.00 2.019±0.37 2.409±0.00
ENST00000509168 N/A N/A 5.417±0.00 40.873±0.00 N/A N/A N/A N/A 2.798±0.00 1.434±0.00 N/A N/A N/A N/A
ENST00000511651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511753 N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000511800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515287 N/A N/A 3.441±0.00 N/A N/A N/A N/A 1.043±0.00 N/A N/A 0.511±0.00 N/A N/A 10.176±0.00
ENST00000515440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242318 ENST00000485315 N/A 0.176±0.00 N/A 0.276±0.25 0.582±0.00 0.088±0.00 0.111±0.00 0.659±0.61 0.663±0.00 N/A N/A 0.038±0.00 0.080±0.00 0.117±0.00
ENSG00000251523 ENST00000505408 0.183±0.00 0.195±0.00 N/A 0.137±0.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00

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