C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP1, GTP-GDP dissociation stimulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339360 RAP1GDS1-006 ENSG00000138698 9606 + 4:98261518-98442334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyOvaryPlacentaENST00000339360
Transcript ID Breast Colon Heart Kidney Ovary Placenta
ENST00000339360 0.755±0.00 1.742±0.00 0.420±0.01 1.270±0.00 1.336±0.00 1.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C0 CIL_0005C0_0002 CGP 4:98261384-98658629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 NAS GTPase activator activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0014829 IEA vascular smooth muscle contraction
GO:0031034 IEA myosin filament assembly
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0032471 IMP negative regulation of endoplasmic reticulum calcium ion concentration
GO:0051561 IMP positive regulation of mitochondrial calcium ion concentration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098574 Rap1gds1-202 protein_coding Mus_musculus 0 2483
ENSMUST00000029796 Rap1gds1-201 protein_coding Mus_musculus 0 1736
ENSDART00000109507 RAP1GDS1-201 protein_coding Danio_rerio 0 468

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